marbl/CHM13

Y chromosome

Closed this issue · 2 comments

colindaven commented

Hi,

are you aiming to integrate an existing (or newly assembled) Y chromosome at some point to make this a general purpose genome? Or is this not planned at present ?

I almost used this in a metagenomics reference sequence collection (i.e. for excluding non-microbial reads from the patient) but only just noticed that the Y chromosome was missing.

Thanks for your efforts.
Colin

skoren commented

There is no Y chromosome in CHM13 so it can't be finished from this line. We do have plans to use other cell lines to finish Y but in the meantime you can use the Y chromosome from GRCh38.

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colindaven commented

Ok, thanks!