marbl/merqury

error with finding bedtools and argparse

olympus-terminal opened this issue · 1 comments

These tools are installed, but I am getting the error:

ERROR: Unable to locate a modulefile for 'bedtools'
Loading module 'R/4.2.1'
Loading required package: argparse
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘argparse’
Loading required package: ggplot2
Loading required package: scales
Error in ArgumentParser(description = "Make block N* or NG* plots. Applicable for scaffolds, contigs, and phased blocks.") :
could not find function "ArgumentParser"
Execution halted
Loading required package: argparse
Warning message:
In library(package, lib.loc = lib.loc, character.only = TRUE, logical.return = TRUE, :
there is no package called ‘argparse’
Loading required package: ggplot2
Loading required package: scales
Error in ArgumentParser(description = "Make block N* or NG* plots. Applicable for scaffolds, contigs, and phased blocks.") :
could not find function "ArgumentParser"
Execution halted

Duplicate with #131