This repository contains instructions and command-lines covered in the AGBT-Ag workshop, "Getting Over the T2T Finish Line".
For a more detailed, general genome assembly tutorial, please refer to this excelent material. The material was developed for a 3-day workshop to share genome assembly and evaluation strategies used by the HPRC, at Genomics Aotearoa. It covers a veriety of details that won't be covered in our workshop.