Explore alternate correction strategies

[skoren]

Current correction works well but is quite slow due to the cost of overlapping, making up >50% of the total verkko runtime.

Options include:

• lja w/the --dimer-compress 1000000000,1000000000,1 option to avoid compressing dimers
• hifiasm
• faster potential overlap identification followed by edlib (aka the mhap strategy)

Results from testing so far on HG002:

• current correction - T2T ctg/scf 15/26, QV 53
• lja - T2T ctg/scf 4/10, QV 53
• hifiasm - T2T ctg/scf 8/15, QV 45

This would seem to indicate hifiasm is over-homogenizing the reads confusing the final assignment and thus consensus. LJA ran w/dimer compression so this likely hurt our ONT resolution alignment and needs to be re-run.