Pinned Repositories
alen
Simple terminal alignment viewer
BioStockholm.jl
Julia parser for the Stockholm file format (.sto) used for multiple sequence alignments (Pfam, Rfam, etc)
DiffFoldRNA.jl
Differentiable RNA partition function and sequence design
dss-opt
Dynamics in sequence space optimisation for RNA sequence design
FoldRNA.jl
Nucleic acid secondary structure prediction and analysis
LinearFold.jl
Julia interface to LinearFold RNA structure prediction programs: LinearFold, LinearPartition, LinearSampling, and LinearTurboFold
Llama.jl
Julia interface to llama.cpp, a C/C++ library for running language models
PlotRNA.jl
Plot nucleic acid secondary structures with Julia
RNAstructure.jl
Julia interface to the RNAstructure program suite for RNA structure prediction and analysis
ViennaRNA.jl
Julia interface to ViennaRNA for RNA structure prediction and analysis
marcom's Repositories
marcom/Llama.jl
Julia interface to llama.cpp, a C/C++ library for running language models
marcom/ViennaRNA.jl
Julia interface to ViennaRNA for RNA structure prediction and analysis
marcom/RNAstructure.jl
Julia interface to the RNAstructure program suite for RNA structure prediction and analysis
marcom/LinearFold.jl
Julia interface to LinearFold RNA structure prediction programs: LinearFold, LinearPartition, LinearSampling, and LinearTurboFold
marcom/BioStockholm.jl
Julia parser for the Stockholm file format (.sto) used for multiple sequence alignments (Pfam, Rfam, etc)
marcom/FoldRNA.jl
Nucleic acid secondary structure prediction and analysis
marcom/PlotRNA.jl
Plot nucleic acid secondary structures with Julia
marcom/DiffFoldRNA.jl
Differentiable RNA partition function and sequence design
marcom/dss-opt
Dynamics in sequence space optimisation for RNA sequence design
marcom/alen
Simple terminal alignment viewer
marcom/BinaryBuilderBase.jl
marcom/BinaryBuilder_DssOpt_jll.jl
Julia BinaryBuilder script for building DssOpt_jll
marcom/bioconda-recipes
Conda recipes for the bioconda channel.
marcom/CassetteOverlay.jl
An experimental simple method overlay mechanism for Julia
marcom/DssOpt.jl
Julia interface to dss-opt RNA sequence design programs
marcom/DssOpt_jll.jl
marcom/Eyeball.jl
Object and type viewer for Julia
marcom/fr3d-python
Python implementation of the FR3D software for searching and annotating RNA 3D structures
marcom/Infernal.jl
marcom/julia
The Julia Programming Language
marcom/KMC
Fast and frugal disk based k-mer counter
marcom/libcifpp
Library containing code to manipulate mmCIF and PDB files
marcom/llama.cpp
Port of Facebook's LLaMA model in C/C++
marcom/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
marcom/PCFGs.jl
Probabilistic Context-Free Grammars in Julia
marcom/PkgEval.jl
Keeping tabs on the julia ecosystem
marcom/TestDeploy_Windows_DSSP_jll
marcom/ViennaRNA
The ViennaRNA Package
marcom/WebBlast.jl
marcom/Yggdrasil
Collection of builder repositories for BinaryBuilder.jl