/trackviewer

Browse cell tracks from segmented sample

Primary LanguagePython

Track Viewer

Browse interactively cell tracks from segmented samples

To install

pip install rich
pip install -U git+https://github.com/marcomusy/vedo.git
git clone https://github.com/marcomusy/trackviewer.git

To run

cd trackviewer
python main.py

Mouse and Keyboard controls

While in the application press:

- arrows to navigate
    left/right to change frame
    up / down  to change track
- drag mouse to rotate the scene in the left panel
- right-click and drag to zoom in and out
- click in right panel to show closest tracks
- 1-9 (on keypad) or + to change volume channel
- l to show track line
- c to show closest ids
- x to jump to the closest track
- t to manually input a track id
- J to join the current track to a specified one
- S to split the current track in half
- W to write the edited track to disk
- o to enable/disable drawing a reference spline
- O to find tracks in the (anti-clock-wise) spline
- p to print current mouse coordinates (in pixels)
- r to reset camera
- q to quit