Metabolic pathways aligment using Petri nets. metapynets is an implementation of algorithm described on the
paper Local piecewise alignment of metabolic pathways. It allows compare two metabolic pathways represented as Petri
nets in PNML (Petri Net Markup Language).
- Install dependencies:
pip install -r requirements.txt
- Usage:
python metapynets.py pnml/pnml_hsa00010.xml pnml/pnml_mmu00010.xml