Pinned Repositories
automated_processing_scrnaseq
barrnap
:microscope: :leo: Bacterial ribosomal RNA predictor
bat_paper
biostat22_vis
CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
Cello-v2
Cello v2 is the continuation of the Cello genetic circuit design software.
cello2
3d semester, biotechnology seminar: cello-2 practice
cg_calendar
cham-tracker
A simple tg bot for tracking chameleon activity
pwannot
R package for automated pathway annotation in single-cell RNA-seq
mariafiruleva's Repositories
mariafiruleva/bat_paper
mariafiruleva/biostat22_vis
mariafiruleva/CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
mariafiruleva/Cello-v2
Cello v2 is the continuation of the Cello genetic circuit design software.
mariafiruleva/cello2
3d semester, biotechnology seminar: cello-2 practice
mariafiruleva/cg_calendar
mariafiruleva/cham-tracker
A simple tg bot for tracking chameleon activity
mariafiruleva/edenisov
mariafiruleva/epigenetics_course
This repository contains all homeworks related to epigenetics course
mariafiruleva/hyperskill_docker_composer
mariafiruleva/metagenomics
mariafiruleva/miloR
R package implementation of Milo for testing for differential abundance in KNN graphs
mariafiruleva/navalny
navalny stylometry
mariafiruleva/pan_cancer_t_cells_atlas_processing
mariafiruleva/phylogenetics
mariafiruleva/pia3_amphipod_opsins
mariafiruleva/pop_genetics
mariafiruleva/regulons_interactive
mariafiruleva/ris_smk
mariafiruleva/sc_athero_itmo_master
The repository contains code related to the master project (ITMO University, Bioinformatics and Systems Biology program).
mariafiruleva/sc_bat
mariafiruleva/sccaf_bench
mariafiruleva/scn
mariafiruleva/scn_source
mariafiruleva/scnprep_scanpy
scRNA-seq scanpy analysis & conversion to SCN format
mariafiruleva/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
mariafiruleva/sysbio_ex
mariafiruleva/test_jekyll
mariafiruleva/ti_slingshot
mariafiruleva/trajectory_inference
Both tutorial and basic pipeline for scRNA-seq trajectory analysis using dyno wrapper