/ConnectedLizards_NeuroMatch2020

Group project on analyzing Nick Steinmetz's data at NeuroMatch2020.

Primary LanguageJupyter NotebookMIT LicenseMIT

ConnectedLizards_NeuroMatch2020

Group project on analyzing Nick Steinmetz's data at NeuroMatch2020 https://www.nature.com/articles/s41586-019-1787-x

Meeting with our mentor, Matthew Kaufman on

Tue 21 @ 2:30 PM UTC;

Fri 24 @ 2:30 PM UTC;

Mon 27 @ 2:30 PM UTC;

Tue 28 @ 2:30 PM UTC;

Download the Steinmetz's Dataset https://figshare.com/articles/Dataset_from_Steinmetz_et_al_2019/9598406

Wiki on the Steinmetz's dataset https://github.com/nsteinme/steinmetz-et-al-2019/wiki/data-files

Steinmetz's dataset: script for location of the units --> https://github.com/MouseLand/steinmetz2019_NMA/blob/master/steinmetz_loader.py

Neuromatch google colab https://colab.research.google.com/github/NeuromatchAcademy/course-content/blob/master/projects/load_steinmetz_decisions.ipynb

Elephant Toolkit https://elephant.readthedocs.io/en/latest/install.html

affinewarp Toolkit https://github.com/ahwillia/affinewarp

Midbrain Regions: 'SCs','SCm','MRN','APN','PAG','ZI' Forebrain Regions: 'MOs','PL','ILA','ORB','MOp','SSp'