Pinned Repositories
contributor-role-ontology
This ontology provides contribution roles for use in crediting persons or organizations.
credit-ontology
An OWL implementation of CRediT; a high-level classification of the diverse roles performed in the work leading to a published research output in the sciences. Its purpose to provide transparency in contributions to scholarly published work, to enable improved systems of attribution, credit, and accountability.
catinabox
Intro to Testing and Test Automation in Python
disruptive-papers-fetal-surgery
Python code for disruptive papers in fetal surgery project
hello-world-bot
A template for creating a Twitter bot that tweets lines of a text one at a time.
pairwise-pubmed-search-generator
A web application for building PubMed search strings from pairwise combinations of two lists.
try_git
ohsu-entities
OHSU Entities Ontology
vivo4hp
VIVO4HP is an extension of VIVO-ISF for describing historical persons
marijane's Repositories
marijane/disruptive-papers-fetal-surgery
Python code for disruptive papers in fetal surgery project
marijane/fetal-surgery-disruptive-papers
marijane/pairwise-pubmed-search-generator
A web application for building PubMed search strings from pairwise combinations of two lists.
marijane/conda
Specifying a conda environment with `environment.yml`
marijane/github-skillup-2024-05-30-marijane
An example lesson teaching how to bake sourdough cinnamon rolls.
marijane/githubPagesTutorial
Tutorial on Setting Up a Github Page
marijane/hedgebill
hedgebill is a tool for collaboratively creating and managing reproducible search hedges
marijane/hello-world
practice repository for the NNLM R5 Library Carpentry workshop, October 17-19, 2023
marijane/invenio-app-rdm
RDM flavour of Invenio
marijane/invenio-rdm-records
DataCite-based data model for InvenioRDM flavour.
marijane/lcw2022
NCDS Library Carpentry Workshop Materials
marijane/marijane.github.io
marijane/my-first-rtd
A sample repository for use in the BioData Club DIY Documentation Workshop
marijane/obo-tutorial
A tutorial on using Open Biological and Biomedical Ontologies (OBO)
marijane/OBOFoundry.github.io
OBO Foundry Ontology Registry
marijane/ontology-development-kit
Bootstrap an OBO Library ontology
marijane/OpenRefine-ecology-lesson
Data Cleaning with OpenRefine for Ecologists
marijane/planets
Software Carpentries Git lesson example repo
marijane/purl.obolibrary.org
A new system for managing OBO PURLs
marijane/pymed
PyMed is a Python library that provides access to PubMed.
marijane/python-novice-inflammation
Software Carpentry introduction to Python for novices using inflammation data.
marijane/robot
ROBOT is an OBO Tool
marijane/slackthemes
A Slack sidebar theme browser
marijane/sparql-dataframe
Convert SPARQL results to a pandas dataframe
marijane/sphinxdoc-test
marijane/support-tickets
marijane/TemaTres-Vocabulary-Server
Web application for management formal representations of knowledge, like controlled vocabularies, taxonomies, thesauri and glossaries
marijane/tislab.org
Public-facing website for tislab.org
marijane/w3id.org
Website source code for w3id.org.
marijane/Web-Karma
Information Integration Tool