Pinned Repositories
CMIP6
Visualising and reprojecting CMIP6 data from nc files
coral-seed-banks
Code and data for Doropoulos et al (2021) "Cryptic coral recruits as dormant ‘seed banks’: an unrecognised mechanism of rapid reef recovery" Ecology
coralseed
coralseed: a spatially explicit reef-scale model of coral settlement following larval reseeding
DCIEM
evolutionary-history-coral-reef-resilience
Code and data for Roff (2020) Evolutionary history drives biogeographic patterns of coral reef resilience Bioscience https://doi.org/10.1093/biosci/biaa145
global-predictions-of-coral-reef-dissolution
Code and data for Wolfe & Roff (2021) "Global predictions of coral reef dissolution in the Anthropocene" Communications Earth and Environment
marine-ecologist's Repositories
marine-ecologist/CMIP6
Visualising and reprojecting CMIP6 data from nc files
marine-ecologist/coralseed
coralseed: a spatially explicit reef-scale model of coral settlement following larval reseeding
marine-ecologist/Caribbean-structural-complexity
Code and data for Roff et al (2020) Multi-decadal changes in structural complexity following mass coral mortality on a Caribbean reef. Biogeosciences https://doi.org/10.5194/bg-17-5909-2020
marine-ecologist/coral-seed-banks
Code and data for Doropoulos et al (2021) "Cryptic coral recruits as dormant ‘seed banks’: an unrecognised mechanism of rapid reef recovery" Ecology
marine-ecologist/DCIEM
marine-ecologist/evolutionary-history-coral-reef-resilience
Code and data for Roff (2020) Evolutionary history drives biogeographic patterns of coral reef resilience Bioscience https://doi.org/10.1093/biosci/biaa145
marine-ecologist/global-predictions-of-coral-reef-dissolution
Code and data for Wolfe & Roff (2021) "Global predictions of coral reef dissolution in the Anthropocene" Communications Earth and Environment
marine-ecologist/r-code-repository
Examples for R functions and analysis with real-world data
marine-ecologist/ape
:exclamation: This is a read-only mirror of the CRAN R package repository. ape — Analyses of Phylogenetics and Evolution. Homepage: http://ape-package.ird.fr/, https://github.com/emmanuelparadis/ape Report bugs for this package: https://github.com/emmanuelparadis/ape/issues
marine-ecologist/Aqua-Illumination-BLE-functions
translating ble from Aqua Illumination peripherals
marine-ecologist/as-the-fish-swims
Spatial analysis of shortestPaths to quantify "as the fish swims" distances between habitats within seascapes
marine-ecologist/caRbs
R package for the computation of carbonate budgets across the GBR
marine-ecologist/coloured-larvae
Colouring coral larvae for tracking dispersal
marine-ecologist/Coral-recovery-manuscript
Repository of code to reproduce analyses and Figures in Emslie et al (2024) "Increasing disturbance frequency undermines coral recovery"
marine-ecologist/earth
a project to visualize global weather conditions
marine-ecologist/ecofun
ecofun - R package for random ecological functions
marine-ecologist/fert-model
marine-ecologist/Futurefunction_GCB
marine-ecologist/GBR-coral-bleaching
Analysis of mass coral bleaching events on the Great Barrier Reef
marine-ecologist/GBR-coral-restoration
Spatial analytics of restoration on the Great Barrier Reef
marine-ecologist/leaflet-map-simple
Simple Leaflet map template for new users to fork, edit, and host
marine-ecologist/marine-ecologist
Config files for my GitHub profile.
marine-ecologist/nGBR-DHW
Analysis of NOAA CRW data for Lizard Island (nGBR) 2010-2024
marine-ecologist/rCDO
marine-ecologist/reefspawn
Spatially explicit modelling of coral spawning on the Great Barrier Reef
marine-ecologist/rOceanData
rOceanData: a package to simplify downloading, extracting, and visualising ocean satellite data
marine-ecologist/sensorflow
Arduino code repository for flow sensor development
marine-ecologist/spatialtools
collection of spatial tools for ecology
marine-ecologist/testpkg
marine-ecologist/tidyseqs
toolkit of functions to tidy and visualise ITS2 sequence profiles