/hla-model-database

Database of HLA protein models generated via ESMFold (https://esmatlas.com)

Primary LanguageRubyMIT LicenseMIT

HLA Model Database

This is a database of HLA protein models generated via ESMFold (https://esmatlas.com). Updated with IPD-IMGT/HLA, release 3.54 (2023-10). For Research Use Only. Not for use in diagnostic procedures.

Instructions

Current HLA models are in the output folder. Of the 21,132 HLA sequences available at the latest IPD-IMGT/HLA release, 11,040 had the expected length (regarding a reference mature HLA protein of the same locus) and were used to generate the models. To generate models for a newer IPD-IMGT/HLA release, run ruby run.rb.

Support

You can contact me at mariomarroquim@gmail.com.