Pinned Repositories
2018-09-01-IACS
2020-ggg-201b-rnaseq
cfde-submit
DenovoTranscriptome
De novo assembly & annotation of transcriptome data
dib-lab
Issue tracker and Web site for the Lab for Data Intensive Biology at UC Davis.
Everest-eDNA-biodiversity-survey
Pipeline scripts for analyzing Everest WGS and metabarcoding data
genome-grist
map Illumina metagenomes to GenBank genomes
HbirdSeqCap
Scripts used for hummingbird exon capture experiment and population genomic analyses
Saiga
A DNA barcoding bioinformatics pipeline for MinION sequencing
Transcriptome_pipeline
Scripts used for transcriptome and PAML analyses
marisalim's Repositories
marisalim/HbirdSeqCap
Scripts used for hummingbird exon capture experiment and population genomic analyses
marisalim/Saiga
A DNA barcoding bioinformatics pipeline for MinION sequencing
marisalim/Transcriptome_pipeline
Scripts used for transcriptome and PAML analyses
marisalim/Everest-eDNA-biodiversity-survey
Pipeline scripts for analyzing Everest WGS and metabarcoding data
marisalim/2018-09-01-IACS
marisalim/2020-ggg-201b-rnaseq
marisalim/cfde-submit
marisalim/DenovoTranscriptome
De novo assembly & annotation of transcriptome data
marisalim/dib-lab
Issue tracker and Web site for the Lab for Data Intensive Biology at UC Davis.
marisalim/genome-grist
map Illumina metagenomes to GenBank genomes
marisalim/Hbird-nodiv
marisalim/marisalim.github.io
marisalim/NGSpeciesID
Reference-free clustering and consensus forming of targeted ONT reads
marisalim/shell-novice
Software Carpentry introduction to the shell for novices.
marisalim/stonybrook_juypterworkflow
example workflow linking jupyter notebooks and Github
marisalim/testing-binders
marisalim/testing-Rstudio-binder
marisalim/the-fair-cookbook
NIH CFDE project for creating a collection of FAIRification recipes
marisalim/training-R-binder
Binder for teaching R