Repository holding template structure for data science.
curl -s -L https://raw.githubusercontent.com/mariusgiger/data-science-template/master/setup.sh | bash
run the following command:
./start.sh
This will enter the virtual environment and start jupyter. Stop it by pressing Ctrl-c.
You can enter the virtual env manually by running:
source bin/activate
You can then install dependencies:
pip install <name>
Freeze the current dependencies:
pip freeze > requirements.txt
Upgrade all packages:
pip list --outdated --format=freeze | grep -v '^\-e' | cut -d = -f 1 | xargs -n1 pip install -U
pip freeze > requirements.txt
Install jupyter extensions:
pip install -U jupyter_contrib_nbextensions
jupyter contrib nbextension install --sys-prefix
jupyter nbextension enable code_prettify/autopep8
Leave the virtual env using the following command:
deactivate
To fix a broken environment, run the following commands
rm -rf .Python bin/python* lib/python*/* include/python*
pip3 install -U virtualenv
virtualenv -p python3 .
source ./bin/activate
python3 -m pip install --upgrade pip
pip install -r requirements.txt
pip install -U jupyter_contrib_nbextensions
jupyter contrib nbextension install --sys-prefix
jupyter nbextension enable code_prettify/autopep8
ipython kernel install --user --name $project_name --display-name "Python ($project_name)"