chapman-kolmogorov test Error

[sundelinllnl]

Hi, pyemma developers,

I am following the pyemma tutorials for the pentapeptide and I encountered errors at the CK test step, with the following error message:
"m = self._D.shape[0] # this will raise and exception if self._D doesn't exist yet.
AttributeError: 'BayesianMSM' object has no attribute '_D'"

So, how to solve this problem.

Thanks
Delin

[marscher]

cross-posted markovmodel/PyEMMA#1416, fixed by markovmodel/PyEMMA#1418

[omkantnirala]

Hello pyEMMA Team,
I am getting this Error after running below code.
"nstates = 5
cktest = msm.cktest(nstates, mlags=6)
pyemma.plots.plot_cktest(cktest, dt=0.1, units='ns');"
Please tell me how can i fix it?

AttributeError Traceback (most recent call last)
Cell In[34], line 2
1 nstates = 5
----> 2 cktest = msm.cktest(nstates, mlags=6)
3 pyemma.plots.plot_cktest(cktest, dt=0.1, units='ns');

AttributeError: module 'pyemma.msm' has no attribute 'cktest'