/fluid-flow-in-astrocyte-networks-analysis

Supplementary code: Sætra et al. 2023

Primary LanguagePythonMIT LicenseMIT

Supplementary code: Sætra et al. 2023

This repository contains code to reproduce the main results presented in Sætra et al. 2023, Neural activity induces strongly coupled electro-chemo-mechanical interactions and fluid flow in astrocyte networks and extracellular space – a computational study.

Requirements

This code requires that you have the ffian package installed, see https://github.com/martejulie/fluid-flow-in-astrocyte-networks.

Reproducing the results of the paper

To reproduce Figures 2 - 8 from the paper, run reproduce_main_results.py from the src folder. Note that this might run for a few days on a normal computer.