/CS584_Final_Project

Class project: from phenotype to genotype.

Primary LanguagePython

Project description

This is a course project, aiming at exploring whether we can predict SNP mutations from gene expression profile by using advanced DL techniques.

Dataset

  • GTEx portal:

    • Raw read counts
    • VCF
    • eQTLs
  • SNP X whole bloods sample: from Yanlong, cross compare