master-XS

Pinned Repositories

ATAC-pipe
Analysis pipeline for ATAC-seq Data
Language:Python00
ATACseq
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
Language:Shell00
ChIP-seq
Nextflow pipeline for ChIP-seq data quality controls and analysis
Language:HTML0 0 00
ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
Language:Python00
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
Language:Nextflow00
chipseq-1
ChIP-seq peak-calling, QC and differential analysis pipeline (Snakemake port of the nextflow pipeline at https://nf-co.re/chipseq).
Language:Python00
CoTECH
Language:Shell00
cpplot
Visualize the results of cell-cell communication analysis
Language:R00
DeepSEM
Language:Jupyter Notebook00
HumanBreastCellAtlas
Repository for codes for the HBCA paper
Language:R00

master-XS's Repositories

master-XS/ATAC-pipe
Analysis pipeline for ATAC-seq Data
Language:Python00
master-XS/ATACseq
Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)
Language:Shell00
master-XS/ChIP-seq
Nextflow pipeline for ChIP-seq data quality controls and analysis
Language:HTML0 0 00
master-XS/ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
Language:Python00
master-XS/chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
Language:Nextflow00
master-XS/chipseq-1
ChIP-seq peak-calling, QC and differential analysis pipeline (Snakemake port of the nextflow pipeline at https://nf-co.re/chipseq).
Language:Python00
master-XS/CoTECH
Language:Shell00
master-XS/cpplot
Visualize the results of cell-cell communication analysis
Language:R00
master-XS/DeepSEM
Language:Jupyter Notebook00
master-XS/HumanBreastCellAtlas
Repository for codes for the HBCA paper
Language:R00
master-XS/Learn-Bioinformatics
master-XS/Muto_Wilson_NComm_2020
Workflow for analysis of healthy human kidney by snRNAseq and snATACseq
master-XS/my_github
1 0
master-XS/oecophylla
shotgun pipeline
Language:Python0 0
master-XS/RNA-seq-downstream-analysis
Arabidopsis RNA_-seq downstream analysis shiny app
Language:R0 0
master-XS/rnaflow
A simple RNA-Seq differential gene expression pipeline using Nextflow
Language:HTML0 0
master-XS/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
Language:Nextflow0 0
master-XS/sc-GC
Language:Python0 0
master-XS/scKD
Language:R0 0
master-XS/single-cell-best-practices-zh
单细胞最佳实践-中文版
Language:Jupyter Notebook0 0
master-XS/SingleCellCRC-pipeline
Analytical pipeline of scRNA-seq and spatial transcription datastes of CRC
Language:R0 0
master-XS/Snakemake-CHIPseq
pipeline for CHIPseq analysis
Language:Python0 0
master-XS/tooth_scripts
Language:R0 0
master-XS/wgs-Analysis-process
使用gatk进行wgs全基因组分析寻找SNP变异的流程
Language:HTML0 0