matheuscburger/DengueAnalysis

Necessário alterar o parâmetro --gmt para rodar o enriquecimento para o Reactome

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matheuscburger commented

DengueAnalysis/src/enrichment.sh

Line 39 in b0ad6e5

parallel -j 20 "src/microarrayAnalysis/do_ora.R results/enrichment/do_ora/$db/{/.}.tsv --genes {} --gmt config/pathways/BTM.gmt" ::: results/joined_degs/genes/*.txt || { echo "Unable to run ORA for $db"; exit 1; }