matinnuhamunada
Teaching Staff at Universitas Gadjah Mada | Natural Products Genome Mining
Universitas Gadjah MadaYogyakarta
Pinned Repositories
2021-igem-ugm-model
27016-design_build_1
Helper script for teaching DTU Course 27016 - Design Build 1
27255_week_11
Course 27255 - Week 11 | Genome assembly & annotation practicals (https://matinnuhamunada.github.io/27255_week_11/)
30DayChartChallenge
Contributions to the #30DayChartChallenge
bgcflow_wrapper
A snakemake wrapper and utility tools for BGCFlow.
ONT_16S_Analysis
An experimental nanopore only 16s Amplicon analysis
saccharopolyspora_manuscript
SINTA_data_mining
Proyek iseng profiling peneliti life sciences di Indonesia dari http://sinta.ristekbrin.go.id/
trycycler_snakemake_wrapper
Snakemake implementation of https://github.com/rrwick/Trycycler
matinnuhamunada's Repositories
matinnuhamunada/trycycler_snakemake_wrapper
Snakemake implementation of https://github.com/rrwick/Trycycler
matinnuhamunada/ONT_16S_Analysis
An experimental nanopore only 16s Amplicon analysis
matinnuhamunada/saccharopolyspora_manuscript
matinnuhamunada/bigslice
A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
matinnuhamunada/SINTA_data_mining
Proyek iseng profiling peneliti life sciences di Indonesia dari http://sinta.ristekbrin.go.id/
matinnuhamunada/bacillales_genomes_figures
matinnuhamunada/bgcflow_dbt-duckdb
An ELT framework based on DBT and DuckDB to process BGCFlow output tables
matinnuhamunada/biocode
Bioinformatics code libraries and scripts
matinnuhamunada/bioconda-recipes
Conda recipes for the bioconda channel.
matinnuhamunada/chatDuck
🐤 chatDuck - chatting with your DuckDB
matinnuhamunada/Core-Alleleome
Alleleome generation from pangenome data
matinnuhamunada/custom_gbk_project_bgcflow
An example of a customized BGCFlow project with genbank inputs
matinnuhamunada/d3fc-webgl-hathi-explorer
A T-SNE scatter plot implemented using D3FC's WebGL series
matinnuhamunada/data_visualization_notes
A gallery of reproducible bioinformatic data visualization
matinnuhamunada/db-import
antiSMASH DB importer
matinnuhamunada/db-schema
The SQL database schema files for the antiSMASH DB
matinnuhamunada/dbt_cemist_metadata
An ELT framework to extract CeMiSt metadata using dbt
matinnuhamunada/EBI-MGNify-notebooks
MGnify documentation and Jupyter Lab notebooks to support downstream analysis of MGnify data (EMBL-EBI's metagenomics platform)
matinnuhamunada/funannotate_gff_to_json
A quick script for converting GFF3 to json and vice versa
matinnuhamunada/gggenomes
A grammar of graphics for comparative genomics
matinnuhamunada/learn_axolotl
A personal note to use Axolotl
matinnuhamunada/matinnuhamunada
matinnuhamunada/matinnuhamunada.github.io
My personal Github Page, forked from mmistakes/minimal-mistakes
matinnuhamunada/mgnify_misc
matinnuhamunada/NeoGPT-Explorer
Knowledge-graph based chatbot using GPT3 and Neo4j
matinnuhamunada/project-discovery-dashboard
iGEM project discovery over time exploration
matinnuhamunada/qiime2_tutorial
matinnuhamunada/sinta-scraper
Retrieves information from Sinta 3 (https://sinta3.kemdikbud.go.id) via scraping.
matinnuhamunada/umetaflow_tutorial
matinnuhamunada/vm_user_management
Small script to manage users in Azure VM