Competition at the EMBC 2022 Challenge on Detection of Stress and Mental Health Using Wearable Sensors May and June, 2022
- 0. Prerequirements
- 1. Download the repository
- 2. Preparation
- 3. Open the challenge
- 4. Close and Shutdown Jupyter Notebook
- 5. Remove the created virtual environment
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OS: Ubuntu 18.04 LTS or higher, OS X
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Python 3.8
-
Browser (Firefox, Safari or Google Chrome)
a) With git clone:
git clone git@github.com:matpato/CfP-Workshop-and-Challenge-Wellbeing.git
cd CfP-Workshop-and-Challenge-Wellbeing/
b) By retrieving directly the repository zip file
wget https://github.com/matpato/CfP-Workshop-and-Challenge-Wellbeing
cd CfP-Workshop-and-Challenge-Wellbeing/
a) If Anaconda or Miniconda is installed:
- Create virtual environment
conda create --name cfp_wellbeing_isel python=3.8
- Activate the created virtual environment:
conda activate cfp_wellbeing_isel
- Install dependencies:
python3.8 -m pip install -r requirements.txt
- Add the virtual environment to Jupyter:
ipython kernel install --user --name=cfp_wellbeing_isel
b) With venv module:
- Install venv package and create virtual environment:
sudo apt install python3.8-venv
python3.8 -m venv cfp_wellbeing_isel
- Activate the created virtual environment:
source cfp_wellbeing_isel/bin/activate
- Install dependencies:
python3.8 -m pip install -r requirements.txt
- Add the virtual environment to Jupyter:
ipython kernel install --user --name=cfp_wellbeing_isel
- To start the Notebook Server run the following command:
jupyter notebook
Which will open http://localhost:8888/notebooks/ in the default browser.
-
Open the file 'challenge.ipynb'.
-
Click on 'Kernel' > 'Change kernel' > 'cfp_wellbeing_isel' to ensure the challenge is running on the created virtual environment.
a) Shutdown Jupyter Notebook Files from the dashboard
- In the Kernel Sessions tab, click on 'SHUTDOWN' for the appropriate notebook to terminate the session for that notebook.
or
- In the File Browser tab and selecting 'Kernel' > 'Shutdown Kernel'.
b) Shutdown the Jupyter Notebook Local Server
You can also close your terminal by typing the command exit
and hitting Enter.
a) Anaconda or Miniconda
- Deactivate the created virtual environment:
conda deactivate
- Remove the virtual environment and all packages:
conda env remove --name cfp_wellbeing_isel
b) venv
- Deactivate the created virtual environment:
deactivate
- Remove the virtual environment and all packages:
rm -r cfp_wellbeing_isel
jupyter kernelspec uninstall cfp_wellbeing_isel