mattfeng
"For my part I know nothing with any certainty, but the sight of the stars makes me dream." - Vincent Van Gogh
Massachusetts Institute of TechnologyCambridge, Massachusetts
Pinned Repositories
bioinformatics
bioinformatics
bluefire
Scripts for NLP
course-notes
course notes
csaw-hsf-writeups
CSAW High School Forensics Writeups
hackerrank
My solutions to HackerRank problems - learning code through hands-on experience
hsf
CSAW High School Forensics Solutions
openbiochem
Open source resources for biology, chemistry, and computation.
recurrent-extreme-occlusion
Investigating the role of recurrent connections in object recognition under extreme occlusion.
research
research
synbio-core-plasmids
essential synbio plasmids
mattfeng's Repositories
mattfeng/openbiochem
Open source resources for biology, chemistry, and computation.
mattfeng/synbio-core-plasmids
essential synbio plasmids
mattfeng/AlphaFold3
Open source implementation of AlphaFold3
mattfeng/bioinfdata
commonly used bioinformatics data
mattfeng/bioinfutils
utility library for bioinformatics tasks
mattfeng/biologybook
mattfeng/buildingbook
mattfeng/chemutils
utility functions for chemistry in python
mattfeng/curator
curates research papers based on listed interests
mattfeng/diffusionbert
applying diffusion bert to generate protein sequences
mattfeng/dna-manipulations
command line tools for biology sequence manipulation
mattfeng/equiformer
[ICLR'23 Spotlight] Equiformer: Equivariant Graph Attention Transformer for 3D Atomistic Graphs
mattfeng/gatsby-book
Gatsby template for writing technical articles.
mattfeng/learn-r
learn R (hands on R, R for data science)
mattfeng/machine-learning-cheat-sheet
Classical equations and diagrams in machine learning
mattfeng/metastasis
solving metastasis
mattfeng/minisim
Mini computational chemistry simulation engine
mattfeng/opendev
Software development resources for everyone.
mattfeng/openmath
Open source math learning resources.
mattfeng/paper-recs
paper recommendations
mattfeng/progen
Implementation and replication of ProGen, Language Modeling for Protein Generation, in Jax
mattfeng/protein-design
protein design
mattfeng/proteinbert_gen
generative modeling with proteinbert
mattfeng/pymol-scripts
useful pymol scripts
mattfeng/reference
reference sheets
mattfeng/refnet
build graphs of papers to read
mattfeng/reinforcement-learning-an-introduction
Python Implementation of Reinforcement Learning: An Introduction
mattfeng/scripts
productivity scripts
mattfeng/synbiobook
the practical synthetic biology book
mattfeng/tree-diffusion
Diffusion on syntax trees for program synthesis