Pinned Repositories
3d_biplot_gif
Dazzle your friends by plotting your PCA results as a 3D animation!
bird_project
Scripts used to explore the influence of non-coding regions on evolutionary phenotypic diversity in birds (see Yusuf et al, 2020. Genome Research 30(4); 553-565)
extract_4fds
A pipeline to find & extract 4-fold degenerate sites on a SLURM cluster
fasta_manipulate
Simple scripts for various manipulations of fasta files.
ncbi_download
Software to help automate the bulk downloading of reference genomes from NCBI to a SLURM cluster.
NextflowComponentTest
NextflowDemo
ngs_pipe
A pipeline to process NGS data on a SLURM cluster according to GATK best practice
scantools_lite
Software to calculate window-based population genetics metrics on a SLURM cluster.
sra_download
Software to help automate the bulk downloading of SRA files from NCBI to a SLURM cluster using the SRA Toolkit.
mattheatley's Repositories
mattheatley/extract_4fds
A pipeline to find & extract 4-fold degenerate sites on a SLURM cluster
mattheatley/bird_project
Scripts used to explore the influence of non-coding regions on evolutionary phenotypic diversity in birds (see Yusuf et al, 2020. Genome Research 30(4); 553-565)
mattheatley/ncbi_download
Software to help automate the bulk downloading of reference genomes from NCBI to a SLURM cluster.
mattheatley/ngs_pipe
A pipeline to process NGS data on a SLURM cluster according to GATK best practice
mattheatley/scantools_lite
Software to calculate window-based population genetics metrics on a SLURM cluster.
mattheatley/3d_biplot_gif
Dazzle your friends by plotting your PCA results as a 3D animation!
mattheatley/fasta_manipulate
Simple scripts for various manipulations of fasta files.
mattheatley/NextflowComponentTest
mattheatley/NextflowDemo
mattheatley/sra_download
Software to help automate the bulk downloading of SRA files from NCBI to a SLURM cluster using the SRA Toolkit.