mattocanas
Mechanical and Bioengineer interested in applying natural language models to enzyme engineering
Austin, TX
Pinned Repositories
369-Project
Antibody-Antigen-Interaction-Pred-CNN
CNN for Prediction of Antibody Antigen Binding
bookdmobile
CDR-Classification
This notebook uses HuggingFace, GPT2, and ESM to build a transformer model that can predict CDR loops in antibody heavy chain sequences.
ESM-Sequence-Generator
Use ESM to fill in a specified range or residues in a protein sequence of interest. Used in this case for CDR library generation of monoclonal antibodies.
Makemore
NN-Zero-to-Hero Bigram and basic neural net implementation of make more
MLM-Guide
A guide for fine tuning a masked language model with huggingface
MusicAppUI
A UI for a social music app
Novozyme-Stability-Prediction
Notebook for the Novozyme enzyme thermostability kaggle contest
vinyl
music social+ app
mattocanas's Repositories
mattocanas/Antibody-Antigen-Interaction-Pred-CNN
CNN for Prediction of Antibody Antigen Binding
mattocanas/vinyl
music social+ app
mattocanas/369-Project
mattocanas/bookdmobile
mattocanas/CDR-Classification
This notebook uses HuggingFace, GPT2, and ESM to build a transformer model that can predict CDR loops in antibody heavy chain sequences.
mattocanas/ESM-Sequence-Generator
Use ESM to fill in a specified range or residues in a protein sequence of interest. Used in this case for CDR library generation of monoclonal antibodies.
mattocanas/Makemore
NN-Zero-to-Hero Bigram and basic neural net implementation of make more
mattocanas/MLM-Guide
A guide for fine tuning a masked language model with huggingface
mattocanas/MusicAppUI
A UI for a social music app
mattocanas/Novozyme-Stability-Prediction
Notebook for the Novozyme enzyme thermostability kaggle contest
mattocanas/Protein-GPT2-Infilling
This notebook uses GPT2 to learn spans of residues given a surrounding protein context. It can then generate a library of protein sequences for a specified residue span.
mattocanas/socialcalUI
A UI Design for a RN Social Calendar App
mattocanas/Spotify-UI-Clone
A UI clone of spotify
mattocanas/XGBoost-Enzyme-Stability-Pred
Novozyme stability Kaggle competition using XGBoost
mattocanas/zero-to-mastery-ml
All course materials for the Zero to Mastery Machine Learning and Data Science course.