DEVIUM
Dynamic multivariatE data analysis And VIsUalization PlatforM
Interactive plotting and analysis of multivariate data using Shiny or GTK based GUIs.
[Shiny] (http://www.rstudio.com/shiny/)
Prototypes for some of the analyses implemented in Devium can be viewed in the browser using the Shiny framework.
- Heirarchical Cluster Analysis
- [Basic Plotting] (http://spark.rstudio.com/dgrapov/Plotting/)
- [Principal Components Analysis Diagnostics] (http://spark.rstudio.com/dgrapov/PCA/)
[GTK] (http://www.gtk.org/)
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GUI using RGtk2 toolkit implemented with gWidgests
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Dynamic plotting - base and ggplot2
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Linked brushing of multiple plots - iplots
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Network Visualizations - igraph (static, interactive and 3D), Cytoscape (RCytoscape)
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Analyses - univariate and multivariate
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Automated report generation - rsweave
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Data import and linking with MS Excel and Google Spreadsheets
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Successor to imDEV, including improved interface and capabilities
Installation of GTK GUI
Eventually devium will be installed from R as a package and from alternative repositories where it can be bundled with GTK+ components. For now it can be installed by using the source code in the devium/R directory. Copy and paste the following code in to R to source the necessary files.
#load package from github repo
source("http://pastebin.com/raw.php?i=JVyTrYRD")
#check out some of the functions (accesory objects will be cleaned up)
objects()
#launch GUI (watch R console for messages regarding the downloading of dependancies)
devium.gui()
Note if you don't yet have the GTK+ toolkit installed you need to specify to "Install GTK+" when prompted from the R command line.