Pinned Repositories
CSBDeep
Image restoration for fluorescence microscopy
betterplots
Some utilities to create better plots with seaborn
biobeam
GPU accelerated beam propagation tools for biological light tissue simulations
bpm
Opencl accelerated beam propagation in python
gputools
GPU accelerated image/volume processing in Python
napari-particles
neubias_academy_stardist
spimagine
GPU accelerated volume rendering / processing in Python
spotipy
stardist
StarDist - Object Detection with Star-convex Shapes
maweigert's Repositories
maweigert/gputools
GPU accelerated image/volume processing in Python
maweigert/neubias_academy_stardist
maweigert/spotipy
maweigert/napari-particles
maweigert/betterplots
Some utilities to create better plots with seaborn
maweigert/stardist-i2k
maweigert/napari-nlm
maweigert/tutorials
maweigert/thesis_page
maweigert/dl-teaching-resources
Collection of teaching material for deep learning for (biomedical) image analysis
maweigert/napari
napari: a fast, interactive, multi-dimensional image viewer for python
maweigert/teaching-dl-course-2020
EMBL Deep Learning course 2020-21 exercises and materials
maweigert/01_intro_mldl
Intro exercise for ML and DL...
maweigert/backbones
Common neural network architectures implemented in PyTorch
maweigert/cdtriang
maweigert/cellpose
a generalist algorithm for cellular segmentation with human-in-the-loop capabilities
maweigert/EDT
Euclidean Distance Transform
maweigert/embo_2022
CARE/Stardist tutorials for EMBO Practical Course — Computational optical biology 2022
maweigert/fireflyfestival
maweigert/imagej.github.io
GitHub Pages for ImageJ
maweigert/magicgui
build GUIs from python functions, using magic.
maweigert/napari-example-plugin-foofoo
maweigert/napari-foobar
maweigert/napari-points-io
maweigert/normalize_fast
maweigert/pyopencl
OpenCL integration for Python, plus shiny features
maweigert/stardist
StarDist - Object Detection with Star-convex Shapes
maweigert/traccuracy
Utilities for computing common accuracy metrics on cell tracking challenge solutions with ground truth
maweigert/training-resources
Resources for teaching/preparing to teach bioimage analysis
maweigert/zidas_2020_DL_intro_Part_2