maxEntropyProd
I study microbial biogeochemistry and how thermodynamics can be used to understand and predict it.
MBLWoods Hole, MA
Pinned Repositories
bayesian_cbiomes
notebooks and files for the Bayesian CBIOMES workshop
hyperBOB
Optimization using MPI parallel Latin hypercube sampling and BOBYQA
lookup_table_fortran
Linear lookup table implemented in modern Fortran
MEP-ATB
Code developed as part of the NSF Advancing Theory in Biology project. See website.
MEP-AutoHetDet
Code associated with publication on MEP and temporal strategies
MEP-SidersPond
Fortran code used for MEP model to describe microbial biogeochemistry in Siders Pond, MA
PowellOpt
Optimization algorithms by M.J.D. Powell
Trait-Based-Chemostat
Mathematica model for a trait-based model of bacterial growth in a chemostat. This model supports the manuscript "Growth characteristics of natural microbial populations are skewed towards bacteria with low specific growth rates"
maxEntropyProd's Repositories
maxEntropyProd/MEP-SidersPond
Fortran code used for MEP model to describe microbial biogeochemistry in Siders Pond, MA
maxEntropyProd/bayesian_cbiomes
notebooks and files for the Bayesian CBIOMES workshop
maxEntropyProd/hyperBOB
Optimization using MPI parallel Latin hypercube sampling and BOBYQA
maxEntropyProd/lookup_table_fortran
Linear lookup table implemented in modern Fortran
maxEntropyProd/MEP-ATB
Code developed as part of the NSF Advancing Theory in Biology project. See website.
maxEntropyProd/MEP-AutoHetDet
Code associated with publication on MEP and temporal strategies
maxEntropyProd/PowellOpt
Optimization algorithms by M.J.D. Powell
maxEntropyProd/Trait-Based-Chemostat
Mathematica model for a trait-based model of bacterial growth in a chemostat. This model supports the manuscript "Growth characteristics of natural microbial populations are skewed towards bacteria with low specific growth rates"