Compare choices for the likelihood
maxbiostat opened this issue · 0 comments
maxbiostat commented
This issue deals with the choice of likelihood. Let the data be Y_t
and and let the solution to the ode be mu(t)
.
We can either say that
Y_t ~ negative_binomial(mu(t), sigma)
or
Y_t ~ lognormal(log(mu(t)), sigma)
We should test (a) if these make a difference in terms of parameter estimates and ESSs and (b) whether one runs faster than the other.