mayroberts

Pinned Repositories

• lcwgs-population-analysis-minus-the-cursing

  Just trying to figure out how to analyze lcwg data and keep a record of what worked

  10

• genomic-data-analysis

  Pipelines for analyzing genomic or transcriptomic data

  Language:Shell00

• Holacanthus_passer-ONT-Illumina-Genome-Assembly

  Hybrid genome assembly pipeline of Holacanthus passer using Nanopore and Illumina sequencing

  00

• lcwgs-guide-tutorial

  Language:R00

• physalia-lcwgs

  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 11-14, 2021

  Language:HTML00

• pilon

  Pilon is an automated genome assembly improvement and variant detection tool

  Language:Scala00

• psmc

  Implementation of the Pairwise Sequentially Markovian Coalescent (PSMC) model

  Language:C00

• SALSA

  SALSA: A tool to scaffold long read assemblies with Hi-C data

  Language:Python00

• SMSC_2019_Conservation_Genomics

  Genome annotation pipeline - Materials for the 2019 SMSC Conservation Genomics Course

  Language:Jupyter Notebook00

mayroberts's Repositories