Mazurowski Lab

3D-Breast-FGT-and-Blood-Vessel-Segmentation

duke-dbt-data

finetune-SAM

This is an official repo for fine-tuning SAM to customized medical images.

intrinsic-properties

(ICLR 2024) Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.

MRI-deeplearning-tutorial

Source code for my blog post tutorial about how to use deep learning on MR images.

osteoarthritis-classification

this is a implementation for knee KL score prediction.

picard-anomalydetection

Pluralistic Image Completion for Anomaly Detection (Med. Image Anal. 2023)

segment-anything-medical-evaluation

Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

SegmentAnyBone

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

segmentation-guided-diffusion

Easy diffusion models with precise segmentation mask guidance.

mazurowski-lab/segment-anything-medical-evaluation

Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis

mazurowski-lab/finetune-SAM

This is an official repo for fine-tuning SAM to customized medical images.

mazurowski-lab/SegmentAnyBone

SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI

mazurowski-lab/segmentation-guided-diffusion

Easy diffusion models with precise segmentation mask guidance.

mazurowski-lab/duke-dbt-data

mazurowski-lab/3D-Breast-FGT-and-Blood-Vessel-Segmentation

mazurowski-lab/MRI-deeplearning-tutorial

Source code for my blog post tutorial about how to use deep learning on MR images.

mazurowski-lab/intrinsic-properties

(ICLR 2024) Easy tools for measuring the label sharpness and intrinsic dimension of datasets and learned representations, which relate to model generalization and robustness.

mazurowski-lab/osteoarthritis-classification

this is a implementation for knee KL score prediction.

mazurowski-lab/picard-anomalydetection

Pluralistic Image Completion for Anomaly Detection (Med. Image Anal. 2023)

mazurowski-lab/SlicerSegmentWithSAM

3D Slicer extension for Segment Anything Model (SAM) developed by Meta

mazurowski-lab/radiologyintrinsicmanifolds

(MICCAI 2022) Code for "The Intrinsic Manifolds of Radiological Images and their Role in Deep Learning" (intrinsic dimensions)

mazurowski-lab/single-image-test-time-adaptation

Single-image test-time domain adaptation for segmentation models.

mazurowski-lab/ContourDiff

Contour-Guided Diffusion Models for Unpaired Image-to-Image Translation

mazurowski-lab/DBT-cancer-detection-algorithms

Library of lesion detection algorithm codebases from the DBTex Digital Breast Tomosynthesis Lesion Detection Challenge

mazurowski-lab/DBTex-baseline

This is a baseline neural network model for breast tumor detection on the BCS-DBT dataset, to accompany the DBTex challenge.

mazurowski-lab/MRI-parameter-prediction

(MIDL 2023) Code for "Reverse Engineering Breast MRIs: Predicting Acquisition Parameters Directly from Images"

mazurowski-lab/breastMRI_styletransfer

Code for our paper "Deep Learning for Breast MRI Style Transfer with Limited Training Data".

mazurowski-lab/swssl-for-anomaly-detection

SWSSL - Sliding window-based self-supervised learning for anomaly detection in high-resolution images (IEEE Trans. on Medical Imaging 2023)

mazurowski-lab/Supermask

mazurowski-lab/SlicerSegmentHumanBody

3D Slicer extension for SegmentAnyBone developed by Mazurowski Lab

mazurowski-lab/ExtensionsIndex

Slicer extensions index

mazurowski-lab/ExtensionsIndexStable

Slicer extensions index

mazurowski-lab/knee_clf

mazurowski-lab/SlicerExtensionsIndex

Slicer extensions index