Pinned Repositories
cckp-toolkit
CohortFinder
Intelligent data partitioning using quality control metrics
csbc-pson-dcc
Data coordination resources for the NCI CSBC and PS-ON consortia
data-models
Versioned history of the MC2 Center data model
data-models-ARCHIVED
Versioned history of the CCKP data model
data_curator_config
Project configurations for the Data Curator App
mc2-center-dcc
Data coordination resources for CCKP (and MC2 in general)
mc2-dls-form
Data Landscape Survey for MC2
minidream-r-env
Resources for setting up and managing an RStudio environment for interactive mini-DREAM activities
pubmed-crawler
PubMed Crawler for CCKP publication manifest
Multi-Consortia Coordinating Center's Repositories
mc2-center/data-models
Versioned history of the MC2 Center data model
mc2-center/minidream-r-env
Resources for setting up and managing an RStudio environment for interactive mini-DREAM activities
mc2-center/cckp-toolkit-workflow
mc2-center/cckp-toolkit
mc2-center/csbc-pson-dcc
Data coordination resources for the NCI CSBC and PS-ON consortia
mc2-center/data-models-ARCHIVED
Versioned history of the CCKP data model
mc2-center/data_curator_config
Project configurations for the Data Curator App
mc2-center/pubmed-crawler
PubMed Crawler for CCKP publication manifest
mc2-center/CohortFinder
Intelligent data partitioning using quality control metrics
mc2-center/HistoQC
HistoQC is an open-source quality control tool for digital pathology slides
mc2-center/mc2-center-dcc
Data coordination resources for CCKP (and MC2 in general)
mc2-center/mc2-dls-form
Data Landscape Survey for MC2
mc2-center/mcmicro
Multiple-choice microscopy pipeline
mc2-center/minidream-challenge
mc2-center/nf-histoqc
A Nextflow wrapper for HistoQC
mc2-center/.github
mc2-center/csbc-pson-manifest
A Shiny app to add manifests to the Cancer Complexity Knowledge Portal.
mc2-center/data_curator
Data Ingest Shiny App
mc2-center/DCA-Data-Ingress-Docs
Documentation for the MC2 data ingress workflow - to share with tester teams and early adopters.
mc2-center/histoqc-openslide-converter
mc2-center/mcmicro_workshop_2024
Respository hosting materials related to the MCMICRO workshop, held during the NCI Junior Investigator Annual Meeting, August 22-23, 2024
mc2-center/metadata-dashboard
mc2-center/minidream-challenge-2018
mc2-center/minidream-containers
What you need to host a miniDREAM challenge
mc2-center/RFC-Webpage
mc2-center/schema_visualization
This repository is for extracting D3 and Javascript code from observable to produce schema visualization
mc2-center/UnMicst
UNet script, model, sample data