This repository includes scripts written using Python language to analyse eukaryotic communities associated to marine sponges using the 18S rRNA marker gene. References to the work using these custom scripts will be provided upon acceptance for publication.
mchaib/Eukaryote-community
This repository includes scripts written using Python language to analyse eukaryotic communities associated to marine sponges using the 18S rRNA marker gene. References to the work using these custom scripts will be provided upon acceptance for publication. Two scripts are available: one to dereplicate sequences at 100% identity, and one to expand dereplicated sequences taking into account a taxonomic classification.
Python