Pinned Repositories
netcirchro
The Networks on Circular Chromosome (NetCirChro) tool has been developed by the NIAID Bioinformatics and Computational Bioscience Branch (BCBB) to enable users of the network visualization platform Cytoscape to overlay networks onto a circular chromosomal map. Data selection is synchronized between Cytoscape and the NetCirChro plug-in, allowing users to leverage Cytoscape’s rich features for navigation, search, filtering, and highlighting of complex microbial genome datasets. NetCirChro helps scientists discover the potential role of gene organization in functional regulatory networks. It also assists researchers in understanding the functional properties of neighboring genes.
open-sourcerer
DIY Skill
templates
COVID-19-Autopsy-SAS-Code
dsb_manuscript
Code to reproduce results from manuscript "Normalizing and denoising protein expression data from droplet-based single cell profiling"
metagenote
nbp-dbinfo-code
Welcome to the repo that houses information for publicly available code, scripts and pipelines generated by the NIAID community. Information here is also used to populate the Code page on the NIAID Bioinformatics Portal.
nbp_events_niaid
niaid.github.io
spice
SPICE is a data mining software application that analyzes large FLOWJO data sets from polychromatic flow cytometry and organizes the normalized data graphically. SPICE enables users to discover potential correlations in their experimental data within complex data sets.
mchldln's Repositories
mchldln/netcirchro
The Networks on Circular Chromosome (NetCirChro) tool has been developed by the NIAID Bioinformatics and Computational Bioscience Branch (BCBB) to enable users of the network visualization platform Cytoscape to overlay networks onto a circular chromosomal map. Data selection is synchronized between Cytoscape and the NetCirChro plug-in, allowing users to leverage Cytoscape’s rich features for navigation, search, filtering, and highlighting of complex microbial genome datasets. NetCirChro helps scientists discover the potential role of gene organization in functional regulatory networks. It also assists researchers in understanding the functional properties of neighboring genes.
mchldln/open-sourcerer
DIY Skill
mchldln/templates