mdcao/japsa

Issues

• introducing new variable starting with word 'read' triggers ambiguity in japsa.util.CommandLine

  #40 opened 3 years ago by dn-ra
  0

• jsa.np.rtResistGenes - tmp folder not automatically generated, and _ao.fasta not produced when tmp folder made in advance

  #38 opened 4 years ago by dn-ra
  1

• java.lang.OutOfMemoryError: Requested array size exceeds VM limit

  #36 opened 5 years ago by miltondts
  0

• NullPointerException XM compression

  #35 opened 5 years ago by miltondts
  2

• Understanding of jsa.np.rtSpeciesTyping output

  #34 opened 5 years ago by xlinxlin
  2

• VNTR.xaf

  #30 opened 5 years ago by sarah872
  4

• identity rate in jsa.hts.errorAnalysis

  #33 opened 5 years ago by ardakdemir
  0

• Installation failed

  #31 opened 5 years ago by xlinxlin
  3

• XM data corruption

  #29 opened 5 years ago by KirillKryukov
  0

• VNTRTyper ArrayIndexOutOfBoundsException when handling BAM records with >65535 CIGAR operations

  #27 opened 6 years ago by c-zhou
  2

• Adjusting prior using external indel predictions and confidence calculations

  #3 opened 6 years ago by a113n
  0

• Formula for estimating changes in repeat units

  #2 opened 6 years ago by a113n
  2

• Species binning of fastq

  #26 opened 6 years ago by lachlancoin
  1

• Refactor `consensusSequence()`

  #25 opened 6 years ago by allenday
  2

• npreader

  #15 opened 6 years ago by lmichielsen
  4

• Duplicated reads id issue

  #24 opened 6 years ago by alartin
  1

• option illen doesn't work in capsim

  #23 opened 7 years ago by alartin
  2

• problem with A dynamic, reusable donut chart for D3.js v4

  #20 opened 7 years ago by Infernus92
  4

• BC01 empty

  #11 opened 7 years ago by AhmedAbdelfattah
  1

• Feature request - use floats for base-call quality averages for jsa.np.filter params

  #14 opened 7 years ago
  3

• Release v1.7-05b - jsa.np.npreader

  #13 opened 7 years ago
  1

• Resistance profiling Exception in thread "SSS" java.lang.NullPointerException

  #12 opened 7 years ago by mbhall88
  1