Update current clinicaDL jupyter-book.
Notebooks are generated from python files stored in the src folder.
Automatic generated notebooks are added into the notebooks folder.
To start contributing, start a brand new Conda environment with this command:
make env.conda
Then activate the environment and install depedencies with Poetry:
conda activate ./env
make env.dev
Once installed dependencies. if you want to convert from python files to
notebooks just type make build.notebooks.
To produce the jupyter-book type make build.book.
Remember to activate the conda environment before running these commands.