Pinned Repositories
Actinobacteria_defense_systems
antidefensefinder_2024
coli_phage_interactions_2023
Git repository containing the code and genomics data published in the article "Predicting phage-bacteria interactions at the strain level from genomes"
cury_mordret_et_al_supplementary_data
Supplementary data for the paper "Conservation of bacterial antiviral systems across domains of life reveals novel defense mechanisms in humans", by Cury, Mordret et al.
defense-finder
Systematic search of all known anti-phage systems.
defense-finder-models
MacSyFinder models allowing for a systematic search of anti-phage systems
defense-finder-web
Defense Finder as a web service
Estimating_gender_bias_in_references
lanthiphage_2024
Git repository containing the code, alignement, trees and genomic models used in for the article: "A family of lanthipeptides with anti-phage function"
viperins_evolution_2023
mdmparis's Repositories
mdmparis/defense-finder
Systematic search of all known anti-phage systems.
mdmparis/defense-finder-models
MacSyFinder models allowing for a systematic search of anti-phage systems
mdmparis/Actinobacteria_defense_systems
mdmparis/antidefensefinder_2024
mdmparis/Estimating_gender_bias_in_references
mdmparis/coli_phage_interactions_2023
Git repository containing the code and genomics data published in the article "Predicting phage-bacteria interactions at the strain level from genomes"
mdmparis/cury_mordret_et_al_supplementary_data
Supplementary data for the paper "Conservation of bacterial antiviral systems across domains of life reveals novel defense mechanisms in humans", by Cury, Mordret et al.
mdmparis/defense-finder-web
Defense Finder as a web service
mdmparis/lanthiphage_2024
Git repository containing the code, alignement, trees and genomic models used in for the article: "A family of lanthipeptides with anti-phage function"
mdmparis/viperins_evolution_2023
mdmparis/is110_nop5
Evolutionary history of IS110/Nop5