Handeling N characters in sequences

[ChriKub]

Hi,

when using input sequences that contain N characters (which almost all eukaryote reference sequences do) I get this error message:

Round 0, 0:1048576
Pass Filling Filtering
1 error: Found an invalid character 'N'

Do I need to re-split my input into contigs to use it with TwoPaCo, or is this some kind of bug?

Thanks,
Chris

[ChriKub]

Solved by updating and new install.