Pinned Repositories
BIO340
Experimental Design, Analysis & Interpretation of Data
Cvictoriae_FI3_assembly_annotations
Genome data and annotations for genes and transposons for C. victoriae isolate FI3
FWD_genetics_screen
Collection of scripts for processing re-sequenced UV-mutagenised IPO323 strains
GATK4_Zymoseptoria
This is a snakemake workflow that uses GATK4 to call SNPs against Australian Reference Z. tritici WAI332
genome_assembly_mp1
Snakemake workflow to assemble and query short haplotype genomes.
Mycogenomics-Lab
Lab webpage
NGS_scripts
Scripts for NGS analysis
python-novice-DNA
Software Carpentry introduction to Python for novices using DNA data.
Python_Intro_ANU
python notebooks and example data for bioinformatics-bash-python course run for RSB at ANU
Python_Intro_ANU_RSB
Introduction to Python workshop with heavy emphasis on manipulating DNA data
megancamilla's Repositories
megancamilla/GATK4_Zymoseptoria
This is a snakemake workflow that uses GATK4 to call SNPs against Australian Reference Z. tritici WAI332
megancamilla/FWD_genetics_screen
Collection of scripts for processing re-sequenced UV-mutagenised IPO323 strains
megancamilla/Python_Intro_ANU_RSB
Introduction to Python workshop with heavy emphasis on manipulating DNA data
megancamilla/BIO340
Experimental Design, Analysis & Interpretation of Data
megancamilla/Cvictoriae_FI3_assembly_annotations
Genome data and annotations for genes and transposons for C. victoriae isolate FI3
megancamilla/genome_assembly_mp1
Snakemake workflow to assemble and query short haplotype genomes.
megancamilla/Mycogenomics-Lab
Lab webpage
megancamilla/NGS_scripts
Scripts for NGS analysis
megancamilla/python-novice-DNA
Software Carpentry introduction to Python for novices using DNA data.
megancamilla/Python_Intro_ANU
python notebooks and example data for bioinformatics-bash-python course run for RSB at ANU
megancamilla/Sanctuary_manuscript
Collection of code used in Sanctuary I: A Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens
megancamilla/Scripts-Work-Mac
megancamilla/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
megancamilla/Transposon-Mediated-transfer-of-ToxA
These are supplementary files/data/scripts/cfg files for all analyses conducted for this manuscript