meganlsmith

BinSFS

Create a binned version of the SFS

BJLS-Testing-for-Cryptic-Diversity-in-Tail-Dropper-Slugs

This repository contains the scripts for Smith et al. 2018 Testing for Cryptic Diversity in Tail-dropper Slugs (Genus Prophysaon) BJLS

BuildmSFS

Build the multidimensional SFS from pyrad output files

delimitR

This repository contains the code and manual for the R package delimitR.

dupcoal

Simulate gene trees under a model that allows copy number hemiplasy.

molevolworkshop.github.io

Future web site for the Workshop on Molecular Evolution, Marine Biological Laboratory, Woods Hole, Massachusetts.

phyloGAN

phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.

Primate_Paralogs

Scripts for 'Using all gene families vastly expands data available for phylogenomic inference in primates'

prophysaon_transcriptomics

RFModSel

Demographic Model Selection using Random Forests and the Site Frequency Spectrum

meganlsmith/delimitR

This repository contains the code and manual for the R package delimitR.

meganlsmith/phyloGAN

phyloGAN is a Generative Adversarial Network (GAN) that infers phylognetic relationships.

meganlsmith/BuildmSFS

Build the multidimensional SFS from pyrad output files

meganlsmith/RFModSel

Demographic Model Selection using Random Forests and the Site Frequency Spectrum

meganlsmith/BinSFS

Create a binned version of the SFS

meganlsmith/Primate_Paralogs

Scripts for 'Using all gene families vastly expands data available for phylogenomic inference in primates'

meganlsmith/BJLS-Testing-for-Cryptic-Diversity-in-Tail-Dropper-Slugs

This repository contains the scripts for Smith et al. 2018 Testing for Cryptic Diversity in Tail-dropper Slugs (Genus Prophysaon) BJLS

meganlsmith/dupcoal

Simulate gene trees under a model that allows copy number hemiplasy.

meganlsmith/molevolworkshop.github.io

Future web site for the Workshop on Molecular Evolution, Marine Biological Laboratory, Woods Hole, Massachusetts.

meganlsmith/prophysaon_transcriptomics

meganlsmith/pythonworkshop-undergrads

A python workshop for undergraduates in biological sciences.

meganlsmith/selectionandmigration

Scripts for understanding the impacts of selection on methods for inferring migration.