Pinned Repositories
AuPairWise
Contamination_Detection
Damage-estimator
elasticluster
FM_GCI
submit foundation medicine XML files to Cancer Genome Interpreter API
gcp-docker
Docker Image for Globus Personel Connect Client
gep-r
genexpression based report for patients with multiple myeloma
nextflow-gtool
nextflow for gtool (http://www.well.ox.ac.uk/~cfreeman/software/gwas/gtool.html)
SNPiR
StarCluster-Plugins
meissnert's Repositories
meissnert/gcp-docker
Docker Image for Globus Personel Connect Client
meissnert/nextflow-gtool
nextflow for gtool (http://www.well.ox.ac.uk/~cfreeman/software/gwas/gtool.html)
meissnert/gep-r
genexpression based report for patients with multiple myeloma
meissnert/SNPiR
meissnert/StarCluster-Plugins
meissnert/AuPairWise
meissnert/Contamination_Detection
meissnert/Damage-estimator
meissnert/elasticluster
meissnert/FM_GCI
submit foundation medicine XML files to Cancer Genome Interpreter API
meissnert/gdocs2md
Convert a Google Drive Document to the Markdown format, suitable for publishing.
meissnert/generative-ai-for-beginners
18 Lessons, Get Started Building with Generative AI 🔗 https://microsoft.github.io/generative-ai-for-beginners/
meissnert/intext
Shipping Delay Prediction in Multiple Myeloma
meissnert/knitrBootstrap
A framework to create bootstrap styled HTML reports from knitr Rmarkdown.
meissnert/megSAP
a Medical Genetics Sequence Analysis Pipeline
meissnert/mm_dream_challenge
meissnert/myvariant.R
A R/Bioconductor client for MyVariant.info web services
meissnert/ngs-bits
Short-read sequencing tools
meissnert/OmicsPipe2.0
meissnert/oncokb-annotator
Annotates variants in MAF with OncoKB annotation.
meissnert/scripts
Scripts useful to share
meissnert/STAR-Fusion
STAR-Fusion codebase
meissnert/StarCluster
StarCluster is an open source cluster-computing toolkit for Amazon's Elastic Compute Cloud (EC2).
meissnert/TcellExTRECT
meissnert/TCGA_RNASeq_Clinical
meissnert/vcftidy
normalize, left-align, trim, validate and clean VCF files
meissnert/ViFi
Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.