melissacline
I am a genomics scientist at UC Santa Cruz. I have been working in clinical cancer genetics and the regulation of alternative splicing.
UC Santa Cruz Genomics Institute
Pinned Repositories
brca-exchange
Overall management and deployment of the BRCA Exchange web portal and pipeline scripts
brca-exchange
Overall management and deployment of the BRCA Exchange web portal and pipeline scripts
browserData
CAGI5-BRCA-Assessment
cgData
Python API to work with the cgData standard
config
Configuration files
gdcUtils
Utilities for accessing data over the GDC API
Jul-23-Elements-of-Style-Workflow-Creation-Maintenance
TCGA-GAF-source
Source code for creating and manipulating the TCGA GAF data (version 3.0)
ucscCancer
Python package for cancer code
melissacline's Repositories
melissacline/TCGA-GAF-source
Source code for creating and manipulating the TCGA GAF data (version 3.0)
melissacline/CAGI5-BRCA-Assessment
melissacline/cgData
Python API to work with the cgData standard
melissacline/Jul-23-Elements-of-Style-Workflow-Creation-Maintenance
melissacline/ucscCancer
Python package for cancer code
melissacline/brca-exchange
Overall management and deployment of the BRCA Exchange web portal and pipeline scripts
melissacline/browserData
melissacline/config
Configuration files
melissacline/gdcUtils
Utilities for accessing data over the GDC API
melissacline/hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
melissacline/Kids-First-Elements-of-Style-Workflow-Creation-Maintenance
melissacline/RASL-analysis
Code for analyzing RASL sequencing data to find alternative splicing events linked with myotonic dystrophy
melissacline/vr-spec
Extensible specification for representing and uniquely identifying biological sequence variation