Pinned Repositories
GATK4_Best_Practice
GATK4 Best Practice Nextflow Pipeline
GEMmaker
A NextFlow workflow for converting a set of SRA files to a set of Gene Expression Vectors (GEV)
intermine
A powerful open source data warehouse system
planets
UCT Planets for SWC teaching
recalling
Scripts for recalling several available datasets. The final output will be used by different H3A projects, e.g. ADME, refpanel.
Sarek_CBIO
variant_annotation_scripts
Collection of scripts to run variant annotation tools
vep
Recipe for VEP + Cache
VEP_plugins
Plugins for the Ensembl Variant Effect Predictor (VEP)
WGS-pipeline
Collection of bash scripts for a whole genome sequencing workflow based on GATK best practice guidelines
melnel000's Repositories
melnel000/GATK4_Best_Practice
GATK4 Best Practice Nextflow Pipeline
melnel000/GEMmaker
A NextFlow workflow for converting a set of SRA files to a set of Gene Expression Vectors (GEV)
melnel000/intermine
A powerful open source data warehouse system
melnel000/planets
UCT Planets for SWC teaching
melnel000/recalling
Scripts for recalling several available datasets. The final output will be used by different H3A projects, e.g. ADME, refpanel.
melnel000/Sarek_CBIO
melnel000/variant_annotation_scripts
Collection of scripts to run variant annotation tools
melnel000/vep
Recipe for VEP + Cache
melnel000/VEP_plugins
Plugins for the Ensembl Variant Effect Predictor (VEP)
melnel000/WGS-pipeline
Collection of bash scripts for a whole genome sequencing workflow based on GATK best practice guidelines