menggf

shanghai

Pinned Repositories

tsd
Target sequencing discovery using long reads
Language:Perl42
transgeneR
Transgene integration and rearrangement discovery using NGS
Language:C++72
bireg
Transcription regulation studies
Language:R00
decd
A R package for differential expression analysis and exploratory investigation to complex disease using big data
Language:R01
DEComplexDisease
A R package for exploratory investigation to complex disease
Language:R00
spDEG_and_Association
Code to perform single patient DE analysis and association study
Language:R00
Mime
Machine learning-based integration model with elegant performance
Language:R10
pubtator_reader_writer_in_R
Here are some simple scripts to read, write and operate pubtator data
Language:R10
Vina-GPU
A heterogeneous OpenCL implementation of AutoDock Vina
Language:C++10
Ab3P
Abbreviation definition dection library trained on PubMed abstracts
Language:C00

menggf's Repositories

menggf/REINVENT4
AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.
Language:Python
menggf/Mime
Machine learning-based integration model with elegant performance
1
menggf/timesfm
TimesFM (Time Series Foundation Model) is a pretrained time-series foundation model developed by Google Research for time-series forecasting.
menggf/siRNAseqEva
Language:R
menggf/pubtator_reader_writer_in_R
Here are some simple scripts to read, write and operate pubtator data
Language:R1
menggf/ChatGPT-Paper-Reader
This repo offers a simple interface that helps you to read&summerize research papers in pdf format. You can ask some questions after reading. This interface is developed based on openai API and using GPT-3.5-turbo model.
Language:Python
menggf/RoseTTAFold-All-Atom
menggf/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
menggf/DockStream
DockStream: A Docking Wrapper to Enhance De Novo Molecular Design
Language:Python
menggf/DockStreamCommunity
Language:Jupyter Notebook
menggf/Vina-GPU-CUDA
A CUDA implementation of Vina-GPU v2
Language:C++
menggf/reinvent-models
Language:Python
menggf/GNorm2
menggf/Uni-Mol
Official Repository for the Uni-Mol Series Methods
menggf/BioREx
menggf/DrugEx
Deep learning toolkit for Drug Design with Pareto-based Multi-Objective optimization in Polypharmacology
Language:Python
menggf/Uni-Dock
Uni-Dock: a GPU-accelerated molecular docking program
menggf/torchdrug
A powerful and flexible machine learning platform for drug discovery
Language:Python
menggf/faceswap
Deepfakes Software For All
menggf/GENTRL
Generative Tensorial Reinforcement Learning (GENTRL) model
Language:Python
menggf/GraphINVENT
Graph neural networks for molecular design.
Language:Python
menggf/AIONER
AIONER
menggf/dragon
[NeurIPS 2022] DRAGON 🐲: Deep Bidirectional Language-Knowledge Graph Pretraining
menggf/BioGPT
Language:Python
menggf/transgeneR
Transgene integration and rearrangement discovery using NGS
Language:C++72
menggf/Stock-Prediction-Models
Gathers machine learning and deep learning models for Stock forecasting including trading bots and simulations
menggf/DRL-code-pytorch
Concise pytorch implements of DRL algorithms, including REINFORCE, A2C, DQN, PPO(discrete and continuous), DDPG, TD3, SAC.
menggf/alphafold
Open source code for AlphaFold.
Language:Python
menggf/text_mined_hetnet_manuscript
Manuscript is on using snorkel to extract Heterogeneous Relationships from Pubmed Abstracts.
menggf/ADMET_XGBoost