Pinned Repositories
contact
BRAKER
BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eukaryotic genomes
pharokka
fast phage annotation program
enrichM
Toolbox for comparative genomics of MAGs
PhaGCN2.0
PhaGCN_newICTV
Update model for ICTV2022
-Single-Cell-Sequencing-Clustering-Script
This script is designed to process single-cell sequencing data by reading multiple FASTA files, combining them, aligning the sequences, calculating a similarity matrix, performing clustering, and saving the results. The script uses Clustal Omega for sequence alignment and scikit-learn for clustering.
gene_name
transfer from gene naming to KEGG_ID
RPKM_
RPKM calculation_through python
TOYS
This python script can extract the desired sequence with a specific name from your fasta file
mengyuan09876's Repositories
mengyuan09876/-Single-Cell-Sequencing-Clustering-Script
This script is designed to process single-cell sequencing data by reading multiple FASTA files, combining them, aligning the sequences, calculating a similarity matrix, performing clustering, and saving the results. The script uses Clustal Omega for sequence alignment and scikit-learn for clustering.
mengyuan09876/gene_name
transfer from gene naming to KEGG_ID
mengyuan09876/RPKM_
RPKM calculation_through python
mengyuan09876/TOYS
This python script can extract the desired sequence with a specific name from your fasta file