Pinned Repositories
bayesian-stats-modelling-tutorial
How to do Bayesian statistical modelling using numpy and PyMC3
ci_course_browser_only
OxRSE browser-only Continuous Integration course starting point
example_paper_Neurips_2021
Example LaTex File for a paper
fastcore
Python supercharged for the fastai library
genomedk-docs
Docs for GenomeDK cluster
glmnet_py
glmnet for python
gwas_sim
GWAS simulation with population structure and other confounders
GWASTutorial
GWAS Tutorial for Beginners
impute-me
impute-me taken down repo
pgsbenchmark
Central repo for the privacy-preserving benchmark for polygenic prediction
mennowitteveen's Repositories
mennowitteveen/pgsbenchmark
Central repo for the privacy-preserving benchmark for polygenic prediction
mennowitteveen/bayesian-stats-modelling-tutorial
How to do Bayesian statistical modelling using numpy and PyMC3
mennowitteveen/ci_course_browser_only
OxRSE browser-only Continuous Integration course starting point
mennowitteveen/example_paper_Neurips_2021
Example LaTex File for a paper
mennowitteveen/fastcore
Python supercharged for the fastai library
mennowitteveen/genomedk-docs
Docs for GenomeDK cluster
mennowitteveen/glmnet_py
glmnet for python
mennowitteveen/gwas_sim
GWAS simulation with population structure and other confounders
mennowitteveen/GWASTutorial
GWAS Tutorial for Beginners
mennowitteveen/impute-me
impute-me taken down repo
mennowitteveen/ldpred2_test
Quick test 4 LDpred2
mennowitteveen/limix
mennowitteveen/limix-1
Linear mixed model for genomic analyses.
mennowitteveen/mennowitteveen.github.io
mennowitteveen/pandas-plink
PLINK reader for Python.
mennowitteveen/mjwt
Python package with coding tools, code snippets and notes from Menno Witteveen
mennowitteveen/paper-srbench
Paper support the SRBench project
mennowitteveen/PhenotypeImputation_via_Cotraining
In silico phenotyping via co-training for improved phenotype prediction from genotype
mennowitteveen/PRScs
Polygenic prediction via continuous shrinkage priors
mennowitteveen/PySnpTools
A Python library for reading and manipulating genetic data.
mennowitteveen/PythonTemplate
Python project template for generic libraries
mennowitteveen/recall-ipy
srs-format (an alternative to Anki's *.apkg) reader implementation for Jupyter Notebook.
mennowitteveen/SciLMM
Sparse Cholesky factorIzation Linear Mixed model
mennowitteveen/SMPyBandits
🔬 Research Framework for Single and Multi-Players 🎰 Multi-Arms Bandits (MAB) Algorithms, implementing all the state-of-the-art algorithms for single-player (UCB, KL-UCB, Thompson...) and multi-player (MusicalChair, MEGA, rhoRand, MCTop/RandTopM etc).. Available on PyPI: https://pypi.org/project/SMPyBandits/ and documentation on