menoliu
PhD Candidate @julie-forman-kay-lab. 📍 SickKids, Molecular Medicine Program. University of Toronto, Biochemistry Department.
The Hospital for Sick ChildrenToronto
Pinned Repositories
IDPConformerGenerator
Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space
SPyCi-PDB
Structural Python (Back) Calculator Interface for PDBs
CSpred
UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine learning module that makes predictions from features extracted from the 3D structures of the proteins.
IDPConfGen-WebScriptor
HTML+JS based web-tool to bridge the gap between CL and GU interfaces for IDPConformerGenerator.
IDPConformerGenerator
Build conformational representations of Intrinsically Disordered Proteins by a guided sampling of the protein torsion space. https://idpconformergenerator.readthedocs.io/
int2cart
Building more accurate protein structures from backbone torsion angles
MCSCE
Monte Carlo Side Chain Entropy package for generating side chain packing for fixed protein backbone
SPyCi-PDB
Structural Python (Back) Calculator Interface for PDBs
X-EISD
X-EISD – Extended Experimental Inferential Structure Determination
X-EISDv2
Generalized, modular, and faster version of X-EISD: Extended Experimental Inferential Structure Determination
menoliu's Repositories
menoliu/CSpred
UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine learning module that makes predictions from features extracted from the 3D structures of the proteins.
menoliu/IDPConfGen-WebScriptor
HTML+JS based web-tool to bridge the gap between CL and GU interfaces for IDPConformerGenerator.
menoliu/IDPConformerGenerator
Build conformational representations of Intrinsically Disordered Proteins by a guided sampling of the protein torsion space. https://idpconformergenerator.readthedocs.io/
menoliu/int2cart
Building more accurate protein structures from backbone torsion angles
menoliu/MCSCE
Monte Carlo Side Chain Entropy package for generating side chain packing for fixed protein backbone
menoliu/SPyCi-PDB
Structural Python (Back) Calculator Interface for PDBs
menoliu/X-EISD
X-EISD – Extended Experimental Inferential Structure Determination
menoliu/X-EISDv2
Generalized, modular, and faster version of X-EISD: Extended Experimental Inferential Structure Determination