mesoSPIM

Mesoscale light-sheet microscopes for imaging in cleared tissue.

Switzerland

Pinned Repositories

benchtop-hardware
Hardware documentation for mesoSPIM-Bechtop microscope project
Language:HTML13 5 24
mesoSPIM-color-projection
Code for the depth-to-color coding of image stacks
Language:MATLAB4 2 10
mesoSPIM-control
Image acquisition software for mesoSPIM light-sheet microscopes.
Language:Jupyter Notebook35 12 4411
mesoSPIM-hardware-documentation
Hardware documentation for the mesoSPIM microscope project
32 17 84
mesoSPIM-lazy-loader
Lazy loader napari plugin for mesoSPIM datasets
Language:Python2 4 40
mesoSPIM-powerpoint-documentation
Powerpoint-based documentation of the mesoSPIM project
2 3 00
mesoSPIM-PSFanalysis
Analysis code for light-sheet PSFs
Language:Jupyter Notebook3 4 10
mesoSPIMmat
MATLAB tools for handling mesoSPIM data
Language:MATLAB3 5 20
optical-simulations
Proof of principle simulations of excitation and detection optical arms in mesoSPIM systems
00
pipython
PIPython is a collection of Python modules to access a PI device and process GCS data.
Language:Python0 1 00

mesoSPIM/mesoSPIM-control
Image acquisition software for mesoSPIM light-sheet microscopes.
Language:Jupyter Notebook35 12 4411
mesoSPIM/mesoSPIM-hardware-documentation
Hardware documentation for the mesoSPIM microscope project
32 17 84
mesoSPIM/benchtop-hardware
Hardware documentation for mesoSPIM-Bechtop microscope project
Language:HTML13 5 24
mesoSPIM/mesoSPIM-color-projection
Code for the depth-to-color coding of image stacks
Language:MATLAB4 2 10
mesoSPIM/mesoSPIM-PSFanalysis
Analysis code for light-sheet PSFs
Language:Jupyter Notebook3 4 10
mesoSPIM/mesoSPIMmat
MATLAB tools for handling mesoSPIM data
Language:MATLAB3 5 20
mesoSPIM/mesoSPIM-lazy-loader
Lazy loader napari plugin for mesoSPIM datasets
Language:Python2 4 40
mesoSPIM/mesoSPIM-powerpoint-documentation
Powerpoint-based documentation of the mesoSPIM project
2 3 00
mesoSPIM/image-processing
Collection of python notebooks for mesoSPIM image processing (file format conversion, etc)
Language:Jupyter Notebook0 2 00
mesoSPIM/mesoSPIM-python-tools
Collection of general-purpose tools for handling mesoSPIM data with Python.
Language:Python0 4 00
mesoSPIM/optical-simulations
Proof of principle simulations of excitation and detection optical arms in mesoSPIM systems
00
mesoSPIM/pipython
PIPython is a collection of Python modules to access a PI device and process GCS data.
Language:Python0 1 00