Pinned Repositories
digestiflow-demux
:spaghetti: Digestiflow Demultiplexing Tool
hlama
Simple matching of HTS samples based on HLA typing
scelvis
:sparkler: SCelVis - web-based visualization of single-cell data. :arrow_right: :arrow_right: Demo :arrow_right::arrow_right:
affiliation_generator
Python script to generate list of affiliations for manuscripts
base_mask
Python functions to check base masks and translate to bcl2fastq flavour
progeny_domainadversarial_nn
Domain-Adaptation for Cancer Pathway Prediction
messersc's Repositories
messersc/affiliation_generator
Python script to generate list of affiliations for manuscripts
messersc/base_mask
Python functions to check base masks and translate to bcl2fastq flavour
messersc/progeny_domainadversarial_nn
Domain-Adaptation for Cancer Pathway Prediction
messersc/bih-cluster
BIH Cluster Wiki
messersc/bioconda-recipes
Conda recipes for the bioconda channel.
messersc/cbioportal
cBioPortal for Cancer Genomics
messersc/cd-diagram
Critical difference diagram with Wilcoxon-Holm post-hoc analysis.
messersc/cubi-tk
CUBI Tooling for SODAR, VarFish et al.
messersc/dev_hla
messersc/docs
messersc/jamm
messersc/keras-vis
Neural network visualization toolkit for keras
messersc/MANTIS
Microsatellite Analysis for Normal-Tumor InStability
messersc/messersc
messersc/OptiType
Precision HLA typing from next-generation sequencing data
messersc/pigx_chipseq
Pipeline for Analysis of ChIP-Seq data
messersc/pROC
Display and analyze ROC curves in R and S+
messersc/pytorch_multi_input_example
Multi-Input Deep Neural Networks with PyTorch-Lightning - Combine Image and Tabular Data
messersc/rodeos-ingest
Code for ingesting omics data into omics storage based on iRODS capabilities
messersc/slurm_debug
messersc/speed2
SPEED2:Inferring upstream pathway activity from differential gene expression
messersc/talks
messersc/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
messersc/unofficial_irods_documentation
Best Practices and System Administrator documentation for iRODS systems by the community. NOT affiliated with RENCI or the iRODS project.