metamaden/awesome-nextflow-benchmark

List of NextFlow workflows for benchmarking.

awesome-nextflow-benchmark

List of NextFlow workflows for benchmarking.

General

Instructional

• nextflow_examples -- Example NextFlow benchmark workflows demonstrating different concepts.

Bioinformatics

DNA methylation

• hmflow -- DNAm array preprocessing and analysis benchmarks

RNA-seq

Single-cell/single-nucleus RNA-seq

• decon_devmethod_workflow -- Develop and test new bulk RNA-seq deconvolution methods using sc/snRNA-seq reference datasets.

See also

• awesome-awesomeness : Large list of "awesome-*" style resources.
• awesome-single-cell : Large list of single-cell RNA-seq resources.