Pinned Repositories
auto_barcode
Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files
django-taggit-helpers
Django admin helper classes for django-taggit tags
djangocms-genome-browser
A Django app for incorporating a Dalliance genome browser into a Django site with django CMS-specific features
djangocms-shiny-app
A Django app for adding R Shiny apps to a Django site with django CMS-specific features
jtk-cycle
Bug fix for JTK_CYCLE: Phase estimation breaks when multiple best phases span dawn.
Log-Reproducible
A Perl 5 module to help improve reproducibility
Number-RangeTracker
A Perl 5 module to keep track of numerical ranges quickly
PROVEAN-Assembly-Line
Find amino acid substitutions from SNPs and run PROVEAN to estimate functional severity
pubmed-lookup
Lookup PubMed records and make Publication objects with info about a scientific publication
r_club
Website for UCD Plant Bio R Club
mfcovington's Repositories
mfcovington/djangocms-shiny-app
A Django app for adding R Shiny apps to a Django site with django CMS-specific features
mfcovington/auto_barcode
Extracts fastq reads for specified barcode(s) from one or multiple FASTQ files
mfcovington/djangocms-genome-browser
A Django app for incorporating a Dalliance genome browser into a Django site with django CMS-specific features
mfcovington/Log-Reproducible
A Perl 5 module to help improve reproducibility
mfcovington/Number-RangeTracker
A Perl 5 module to keep track of numerical ranges quickly
mfcovington/bil-paper
mfcovington/brassica_genetic_map_paper
mfcovington/COSOPT-Assembly-Line
Format expression data for COSOPT analysis, run COSOPT, and format the results.
mfcovington/detect-boundaries
mfcovington/Perl-PrereqInstaller
A Perl 5 module for installing missing modules explicitly loaded by a Perl script or module
mfcovington/SNPtools
mfcovington/bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
mfcovington/django-autocomplete-light
A fresh approach to autocomplete implementations, specially for Django. It supports templated autocompletes, foreign key, many to many, generic foreign key, generic many to many, autocompletes that depend on each other, etc, etc ... Status: 2.x.x stable, 1.x.x deprecated. PLEASE DO BUMP your github pull requests !!!
mfcovington/django-filer
File and Image Management Application for django
mfcovington/django-lab-chores
Django app for assigning and tracking lab chores for scientists in a lab
mfcovington/django-lab-members
A Django app to display lab personnel and information about them
mfcovington/django-velcro
mfcovington/djangocms-admin-style
Adds pretty CSS styles for the django CMS admin interface.
mfcovington/djangocms-lab-data
A Django app for organizing data files and sets of data files within a Django site with django CMS-specific features
mfcovington/expHTS
Python application for "Experimental High Throughput Sequencing"
mfcovington/extract-seq-flanking-read
This tool will extract a snippet of sequence upstream of where the read maps to the reference sequence.
mfcovington/ortholog-group-generator
mfcovington/pep8online
Web service for pep8 check
mfcovington/QTL-Visualization
mfcovington/quotes
mfcovington/S.lyc_S.pen_tissue_exp
mfcovington/shiny-cluster-genotypes
An R Shiny app to cluster genotypes within a population
mfcovington/tomato-expression
mfcovington/voting-machine
mfcovington/Workshop_RNAseq
RNAseq workshop